Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Capn1O35350 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Capn1O35350 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Capn1O35350 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capn1O35350 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.6■□□□□ 0.57
Capn1O35350 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Capn1O35350 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capn1O35350 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capn1O35350 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Capn1O35350 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Capn1O35350 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capn1O35350 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Capn1O35350 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capn1O35350 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.59■□□□□ 0.57
Capn1O35350 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capn1O35350 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Capn1O35350 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capn1O35350 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capn1O35350 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.59■□□□□ 0.57
Capn1O35350 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Capn1O35350 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Capn1O35350 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Capn1O35350 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Capn1O35350 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Capn1O35350 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capn1O35350 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Capn1O35350 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capn1O35350 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Capn1O35350 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capn1O35350 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Capn1O35350 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Capn1O35350 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capn1O35350 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capn1O35350 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.57■□□□□ 0.56
Capn1O35350 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capn1O35350 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capn1O35350 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capn1O35350 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Capn1O35350 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Capn1O35350 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.57■□□□□ 0.56
Capn1O35350 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Capn1O35350 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Capn1O35350 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Capn1O35350 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Capn1O35350 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Capn1O35350 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Capn1O35350 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Capn1O35350 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Capn1O35350 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Capn1O35350 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.56■□□□□ 0.56
Capn1O35350 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Capn1O35350 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.56■□□□□ 0.56
Capn1O35350 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.56■□□□□ 0.56
Capn1O35350 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Capn1O35350 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Capn1O35350 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Capn1O35350 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Capn1O35350 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capn1O35350 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capn1O35350 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capn1O35350 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Capn1O35350 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capn1O35350 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Capn1O35350 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Capn1O35350 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capn1O35350 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capn1O35350 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capn1O35350 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Capn1O35350 Gm7143-201ENSMUST00000222811 859 ntBASIC18.54■□□□□ 0.56
Capn1O35350 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capn1O35350 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capn1O35350 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Capn1O35350 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Capn1O35350 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capn1O35350 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capn1O35350 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.53■□□□□ 0.56
Capn1O35350 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.53■□□□□ 0.56
Capn1O35350 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Capn1O35350 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Capn1O35350 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Capn1O35350 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Capn1O35350 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capn1O35350 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capn1O35350 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Capn1O35350 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Capn1O35350 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Capn1O35350 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.52■□□□□ 0.56
Capn1O35350 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capn1O35350 Gm6139-201ENSMUST00000079261 882 ntBASIC18.52■□□□□ 0.56
Capn1O35350 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Capn1O35350 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Capn1O35350 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.51■□□□□ 0.55
Capn1O35350 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capn1O35350 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capn1O35350 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capn1O35350 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Capn1O35350 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Capn1O35350 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capn1O35350 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Capn1O35350 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms