Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Pcf11G3X9Z4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pcf11G3X9Z4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pcf11G3X9Z4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcf11G3X9Z4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcf11G3X9Z4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcf11G3X9Z4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcf11G3X9Z4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pcf11G3X9Z4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcf11G3X9Z4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pcf11G3X9Z4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pcf11G3X9Z4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC31.27■■■□□ 2.6
Pcf11G3X9Z4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pcf11G3X9Z4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pcf11G3X9Z4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
Pcf11G3X9Z4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC31.26■■■□□ 2.6
Pcf11G3X9Z4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
Pcf11G3X9Z4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pcf11G3X9Z4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Pcf11G3X9Z4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Pcf11G3X9Z4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
Pcf11G3X9Z4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcf11G3X9Z4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC31.23■■■□□ 2.59
Pcf11G3X9Z4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
Pcf11G3X9Z4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pcf11G3X9Z4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pcf11G3X9Z4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pcf11G3X9Z4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Pcf11G3X9Z4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC31.22■■■□□ 2.59
Pcf11G3X9Z4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pcf11G3X9Z4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Pcf11G3X9Z4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pcf11G3X9Z4 Gm11421-201ENSMUST00000122124 294 ntBASIC31.2■■■□□ 2.58
Pcf11G3X9Z4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Pcf11G3X9Z4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC31.2■■■□□ 2.58
Pcf11G3X9Z4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC31.2■■■□□ 2.58
Pcf11G3X9Z4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Pcf11G3X9Z4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Pcf11G3X9Z4 Gm10033-202ENSMUST00000211874 928 ntBASIC31.19■■■□□ 2.58
Pcf11G3X9Z4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC31.19■■■□□ 2.58
Pcf11G3X9Z4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pcf11G3X9Z4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pcf11G3X9Z4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC31.19■■■□□ 2.58
Pcf11G3X9Z4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pcf11G3X9Z4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC31.18■■■□□ 2.58
Pcf11G3X9Z4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pcf11G3X9Z4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pcf11G3X9Z4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
Pcf11G3X9Z4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pcf11G3X9Z4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC31.16■■■□□ 2.58
Pcf11G3X9Z4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pcf11G3X9Z4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pcf11G3X9Z4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pcf11G3X9Z4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pcf11G3X9Z4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Pcf11G3X9Z4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Pcf11G3X9Z4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pcf11G3X9Z4 Gm7291-201ENSMUST00000199147 382 ntBASIC31.14■■■□□ 2.58
Pcf11G3X9Z4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pcf11G3X9Z4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Pcf11G3X9Z4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC31.14■■■□□ 2.57
Pcf11G3X9Z4 Mir6236-201ENSMUST00000184437 123 ntBASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC31.13■■■□□ 2.57
Pcf11G3X9Z4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Pcf11G3X9Z4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pcf11G3X9Z4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pcf11G3X9Z4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Pcf11G3X9Z4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pcf11G3X9Z4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms