Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd7A2AJK6 Gm20760-201ENSMUST00000179197 648 ntBASIC20.33■□□□□ 0.84
Chd7A2AJK6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.33■□□□□ 0.84
Chd7A2AJK6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd7A2AJK6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd7A2AJK6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd7A2AJK6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chd7A2AJK6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.32■□□□□ 0.84
Chd7A2AJK6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.31■□□□□ 0.84
Chd7A2AJK6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Gm13234-201ENSMUST00000120010 747 ntBASIC20.31■□□□□ 0.84
Chd7A2AJK6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd7A2AJK6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Chd7A2AJK6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd7A2AJK6 Gm11421-201ENSMUST00000122124 294 ntBASIC20.3■□□□□ 0.84
Chd7A2AJK6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd7A2AJK6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Chd7A2AJK6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd7A2AJK6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd7A2AJK6 Gm7977-201ENSMUST00000193787 748 ntBASIC20.29■□□□□ 0.84
Chd7A2AJK6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd7A2AJK6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd7A2AJK6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd7A2AJK6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd7A2AJK6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.28■□□□□ 0.84
Chd7A2AJK6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd7A2AJK6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd7A2AJK6 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.28■□□□□ 0.84
Chd7A2AJK6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.28■□□□□ 0.84
Chd7A2AJK6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd7A2AJK6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd7A2AJK6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd7A2AJK6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd7A2AJK6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd7A2AJK6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Chd7A2AJK6 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.27■□□□□ 0.84
Chd7A2AJK6 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.27■□□□□ 0.84
Chd7A2AJK6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd7A2AJK6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd7A2AJK6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd7A2AJK6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Chd7A2AJK6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd7A2AJK6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.27■□□□□ 0.83
Chd7A2AJK6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd7A2AJK6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd7A2AJK6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd7A2AJK6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd7A2AJK6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd7A2AJK6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chd7A2AJK6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd7A2AJK6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd7A2AJK6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.26■□□□□ 0.83
Chd7A2AJK6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd7A2AJK6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd7A2AJK6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd7A2AJK6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Mir5133-201ENSMUST00000174955 77 ntBASIC20.25■□□□□ 0.83
Chd7A2AJK6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd7A2AJK6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Gm8520-201ENSMUST00000186517 868 ntBASIC20.24■□□□□ 0.83
Chd7A2AJK6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd7A2AJK6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms