Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm12715-201ENSMUST00000121430 1128 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm11960-201ENSMUST00000122068 925 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Rprl1-202ENSMUST00000198476 238 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm19187-201ENSMUST00000206781 892 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC8.58□□□□□ -1.04
PdfS4R2K0 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 CT485787.1-201ENSMUST00000225617 968 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Rassf8-202ENSMUST00000058538 1131 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm9035-201ENSMUST00000218318 1697 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Gm42971-201ENSMUST00000199228 2079 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC8.58□□□□□ -1.04
PdfS4R2K0 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PdfS4R2K0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC8.57□□□□□ -1.04
PdfS4R2K0 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm8862-201ENSMUST00000198379 1346 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC8.57□□□□□ -1.04
PdfS4R2K0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
PdfS4R2K0 AC115891.3-201ENSMUST00000219161 2472 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 CT009601.1-201ENSMUST00000225567 2705 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm18626-201ENSMUST00000221512 1409 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PdfS4R2K0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
PdfS4R2K0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.57□□□□□ -1.04
PdfS4R2K0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm9230-201ENSMUST00000188228 532 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC8.57□□□□□ -1.04
PdfS4R2K0 AA914427-201ENSMUST00000193194 1166 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm5363-201ENSMUST00000211927 938 ntBASIC8.57□□□□□ -1.04
PdfS4R2K0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms