Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm13996-201ENSMUST00000118456 430 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm20495-201ENSMUST00000173902 235 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm8913-201ENSMUST00000209491 641 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm4157-201ENSMUST00000211647 679 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm9797-202ENSMUST00000218003 294 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Crlf3Q9Z2L7 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 AA474408-201ENSMUST00000098110 3339 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm22133-201ENSMUST00000102082 109 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm12217-201ENSMUST00000118858 696 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm7150-201ENSMUST00000122032 981 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm18753-201ENSMUST00000201000 566 ntBASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Crlf3Q9Z2L7 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Crlf3Q9Z2L7 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms