Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm10434-201ENSMUST00000101158 471 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm37008-201ENSMUST00000195712 319 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm8712-201ENSMUST00000221090 701 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.21□□□□□ -0.62
Sf3a3Q9D554 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.21□□□□□ -0.62
Sf3a3Q9D554 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm20495-201ENSMUST00000173902 235 ntBASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3a3Q9D554 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3a3Q9D554 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms