Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkd1Q99MH6 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkd1Q99MH6 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Defa-ps4-201ENSMUST00000118021 183 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm15617-201ENSMUST00000118973 771 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm22846-201ENSMUST00000157706 270 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm23085-201ENSMUST00000157849 293 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Olfml3-204ENSMUST00000169286 874 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm8342-201ENSMUST00000209839 757 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm5996-201ENSMUST00000211110 718 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkd1Q99MH6 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm13461-201ENSMUST00000120980 662 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Mir6420-201ENSMUST00000185032 102 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm29499-201ENSMUST00000189151 486 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm28329-201ENSMUST00000191208 689 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm29171-201ENSMUST00000191397 486 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Gm4857-201ENSMUST00000192718 785 ntBASIC10.51□□□□□ -0.73
Nkd1Q99MH6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms