Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm23604-201ENSMUST00000104311 132 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm4943-201ENSMUST00000132879 424 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm16288-201ENSMUST00000137940 367 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm23582-201ENSMUST00000158530 139 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ddx55Q6ZPL9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm24294-201ENSMUST00000158295 277 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm6291-201ENSMUST00000179994 309 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Platr10-202ENSMUST00000191479 818 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ddx55Q6ZPL9 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ddx55Q6ZPL9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ddx55Q6ZPL9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms