Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm15617-201ENSMUST00000118973 771 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm8302-201ENSMUST00000119217 852 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm16071-201ENSMUST00000119589 793 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm17826-201ENSMUST00000189720 798 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm37299-201ENSMUST00000193951 826 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm37905-201ENSMUST00000195310 341 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm37826-201ENSMUST00000195329 322 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm42867-201ENSMUST00000202995 469 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.34□□□□□ -0.59
Casc4Q6P2L7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Casc4Q6P2L7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm25148-201ENSMUST00000104611 123 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm12176-201ENSMUST00000121420 875 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Mir7051-201ENSMUST00000184167 73 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm18165-201ENSMUST00000217426 928 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Gm5468-202ENSMUST00000227851 682 ntBASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Casc4Q6P2L7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Casc4Q6P2L7 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.32□□□□□ -0.6
Casc4Q6P2L7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms