Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm8531-201ENSMUST00000188319 893 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm43163-201ENSMUST00000196571 442 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm7600-201ENSMUST00000209657 785 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm19009-201ENSMUST00000223072 823 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Gm8420-201ENSMUST00000097103 598 ntBASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfaip3Q60769 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.57□□□□□ -0.72
Tnfaip3Q60769 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Gm12274-201ENSMUST00000120062 385 ntBASIC10.57□□□□□ -0.72
Tnfaip3Q60769 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Gm9353-201ENSMUST00000200472 604 ntBASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Gm18561-201ENSMUST00000206027 804 ntBASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tnfaip3Q60769 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Gm38359-201ENSMUST00000191884 2225 ntBASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Gm6407-201ENSMUST00000176468 549 ntBASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Gm45594-201ENSMUST00000211717 241 ntBASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Mt1-202ENSMUST00000211807 1085 ntBASIC10.56□□□□□ -0.72
Tnfaip3Q60769 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.56□□□□□ -0.72
Tnfaip3Q60769 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.56□□□□□ -0.72
Tnfaip3Q60769 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms