Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.76□□□□□ -0.69
ClpbQ60649 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ClpbQ60649 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
ClpbQ60649 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.76□□□□□ -0.69
ClpbQ60649 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ClpbQ60649 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
ClpbQ60649 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ClpbQ60649 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
ClpbQ60649 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Gm15615-201ENSMUST00000118876 198 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Gm11244-201ENSMUST00000121243 237 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.75□□□□□ -0.69
ClpbQ60649 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Gm37299-201ENSMUST00000193951 826 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.75□□□□□ -0.69
ClpbQ60649 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
ClpbQ60649 Gm5451-201ENSMUST00000080545 579 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Olfr584-201ENSMUST00000098210 964 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
ClpbQ60649 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.75□□□□□ -0.69
ClpbQ60649 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
ClpbQ60649 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.75□□□□□ -0.69
ClpbQ60649 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
ClpbQ60649 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
ClpbQ60649 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
ClpbQ60649 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Gm12516-201ENSMUST00000120819 385 ntBASIC10.74□□□□□ -0.69
ClpbQ60649 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ClpbQ60649 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.74□□□□□ -0.69
ClpbQ60649 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.74□□□□□ -0.69
ClpbQ60649 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.74□□□□□ -0.69
ClpbQ60649 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms