Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps54Q5SPW0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm14807-201ENSMUST00000116640 983 ntBASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm3793-201ENSMUST00000204973 672 ntBASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm7082-201ENSMUST00000209880 969 ntBASIC13.38□□□□□ -0.27
Vps54Q5SPW0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm9102-201ENSMUST00000219250 465 ntBASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vps54Q5SPW0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm12990-201ENSMUST00000120372 468 ntBASIC13.37□□□□□ -0.27
Vps54Q5SPW0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm22379-201ENSMUST00000157480 131 ntBASIC13.37□□□□□ -0.27
Vps54Q5SPW0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps54Q5SPW0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms