Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smarcc1P97496 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smarcc1P97496 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcc1P97496 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.02□□□□□ -0.16
Smarcc1P97496 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smarcc1P97496 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.02□□□□□ -0.16
Smarcc1P97496 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc1P97496 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm22495-201ENSMUST00000104492 126 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.02□□□□□ -0.17
Smarcc1P97496 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm18014-201ENSMUST00000183369 817 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm43564-201ENSMUST00000196185 211 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm42867-201ENSMUST00000202995 469 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm6518-201ENSMUST00000208450 342 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC14.02□□□□□ -0.17
Smarcc1P97496 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Lect2-202ENSMUST00000225183 823 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 AC121357.1-201ENSMUST00000227365 608 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Smarcc1P97496 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.02□□□□□ -0.17
Smarcc1P97496 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc1P97496 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.01□□□□□ -0.17
Smarcc1P97496 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smarcc1P97496 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smarcc1P97496 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 AC159810.1-201ENSMUST00000214838 1480 ntBASIC14.01□□□□□ -0.17
Smarcc1P97496 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.01□□□□□ -0.17
Smarcc1P97496 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.01□□□□□ -0.17
Smarcc1P97496 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Snord17-201ENSMUST00000104526 238 ntBASIC14.01□□□□□ -0.17
Smarcc1P97496 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcc1P97496 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Gm6352-201ENSMUST00000203583 1134 ntBASIC14.01□□□□□ -0.17
Smarcc1P97496 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Smarcc1P97496 AC107752.1-201ENSMUST00000219362 469 ntBASIC14.01□□□□□ -0.17
Smarcc1P97496 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.01□□□□□ -0.17
Smarcc1P97496 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc1P97496 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.01□□□□□ -0.17
Smarcc1P97496 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Smarcc1P97496 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Smarcc1P97496 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Gm27177-202ENSMUST00000183514 2703 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcc1P97496 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarcc1P97496 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14□□□□□ -0.17
Smarcc1P97496 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc1P97496 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms