Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SgcbP82349 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SgcbP82349 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
SgcbP82349 Gm14659-201ENSMUST00000117667 843 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Gm16166-201ENSMUST00000118291 787 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Gm15617-201ENSMUST00000118973 771 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Gm8302-201ENSMUST00000119217 852 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Gm14665-201ENSMUST00000122294 557 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Gm24514-201ENSMUST00000174961 285 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Mir7076-201ENSMUST00000183519 74 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Gm6562-201ENSMUST00000221903 464 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SgcbP82349 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
SgcbP82349 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SgcbP82349 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.05□□□□□ -0.8
SgcbP82349 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.05□□□□□ -0.8
SgcbP82349 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SgcbP82349 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Gm11451-201ENSMUST00000118946 630 ntBASIC10.04□□□□□ -0.8
SgcbP82349 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.04□□□□□ -0.8
SgcbP82349 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Gm20239-201ENSMUST00000196610 982 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Gm9353-201ENSMUST00000200472 604 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.04□□□□□ -0.8
SgcbP82349 Gm19212-201ENSMUST00000216642 862 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.04□□□□□ -0.8
SgcbP82349 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.04□□□□□ -0.8
SgcbP82349 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SgcbP82349 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Gm8420-201ENSMUST00000097103 598 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SgcbP82349 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms