Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ybx1P62960 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ybx1P62960 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ybx1P62960 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.47□□□□□ -0.57
Ybx1P62960 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ybx1P62960 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.47□□□□□ -0.57
Ybx1P62960 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.47□□□□□ -0.57
Ybx1P62960 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.47□□□□□ -0.57
Ybx1P62960 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.47□□□□□ -0.57
Ybx1P62960 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.47□□□□□ -0.57
Ybx1P62960 Gm13039-201ENSMUST00000118638 794 ntBASIC11.47□□□□□ -0.57
Ybx1P62960 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.47□□□□□ -0.57
Ybx1P62960 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ybx1P62960 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.47□□□□□ -0.57
Ybx1P62960 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.47□□□□□ -0.57
Ybx1P62960 Gm4903-201ENSMUST00000210462 405 ntBASIC11.47□□□□□ -0.57
Ybx1P62960 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.47□□□□□ -0.57
Ybx1P62960 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.47□□□□□ -0.57
Ybx1P62960 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ybx1P62960 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ybx1P62960 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.46□□□□□ -0.57
Ybx1P62960 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
Ybx1P62960 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm9372-201ENSMUST00000168454 430 ntBASIC11.46□□□□□ -0.57
Ybx1P62960 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm20781-201ENSMUST00000193154 693 ntBASIC11.46□□□□□ -0.57
Ybx1P62960 Gm21736-201ENSMUST00000195399 693 ntBASIC11.46□□□□□ -0.57
Ybx1P62960 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.46□□□□□ -0.57
Ybx1P62960 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.46□□□□□ -0.57
Ybx1P62960 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Gm9791-201ENSMUST00000060997 447 ntBASIC11.46□□□□□ -0.57
Ybx1P62960 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ybx1P62960 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ybx1P62960 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.46□□□□□ -0.58
Ybx1P62960 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ybx1P62960 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.46□□□□□ -0.58
Ybx1P62960 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Ybx1P62960 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ybx1P62960 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ybx1P62960 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ybx1P62960 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.46□□□□□ -0.58
Ybx1P62960 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ybx1P62960 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.46□□□□□ -0.58
Ybx1P62960 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.45□□□□□ -0.58
Ybx1P62960 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ybx1P62960 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms