Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rrp1P56183 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rrp1P56183 Gm14592-201ENSMUST00000117201 560 ntBASIC12.58□□□□□ -0.4
Rrp1P56183 Gm12218-201ENSMUST00000117666 399 ntBASIC12.58□□□□□ -0.4
Rrp1P56183 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.58□□□□□ -0.4
Rrp1P56183 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Rrp1P56183 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rrp1P56183 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.58□□□□□ -0.4
Rrp1P56183 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Rrp1P56183 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.58□□□□□ -0.4
Rrp1P56183 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rrp1P56183 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Rrp1P56183 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rrp1P56183 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rrp1P56183 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Gm23061-201ENSMUST00000102348 116 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rrp1P56183 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.57□□□□□ -0.4
Rrp1P56183 Gm12501-201ENSMUST00000119163 529 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rrp1P56183 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rrp1P56183 Gm28450-201ENSMUST00000187349 638 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Gm4482-201ENSMUST00000200876 742 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.57□□□□□ -0.4
Rrp1P56183 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Gm18730-201ENSMUST00000218038 343 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Gm21811-201ENSMUST00000096485 930 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rrp1P56183 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Rrp1P56183 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rrp1P56183 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.57□□□□□ -0.4
Rrp1P56183 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.57□□□□□ -0.4
Rrp1P56183 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rrp1P56183 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.56□□□□□ -0.4
Rrp1P56183 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.56□□□□□ -0.4
Rrp1P56183 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Gm21778-201ENSMUST00000178779 471 ntBASIC12.56□□□□□ -0.4
Rrp1P56183 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Mir6927-201ENSMUST00000184494 71 ntBASIC12.56□□□□□ -0.4
Rrp1P56183 Gm28746-201ENSMUST00000187453 380 ntBASIC12.56□□□□□ -0.4
Rrp1P56183 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.56□□□□□ -0.4
Rrp1P56183 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.56□□□□□ -0.4
Rrp1P56183 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.56□□□□□ -0.4
Rrp1P56183 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rrp1P56183 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms