Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.65□□□□□ -0.7
Cdx2P43241 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.65□□□□□ -0.7
Cdx2P43241 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.65□□□□□ -0.7
Cdx2P43241 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cdx2P43241 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdx2P43241 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Cdx2P43241 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.65□□□□□ -0.71
Cdx2P43241 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Cdx2P43241 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdx2P43241 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdx2P43241 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.65□□□□□ -0.71
Cdx2P43241 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cdx2P43241 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cdx2P43241 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm23595-201ENSMUST00000104306 130 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm12418-201ENSMUST00000118116 942 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Gm8019-201ENSMUST00000119317 587 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm6612-201ENSMUST00000170777 395 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Mir6387-201ENSMUST00000184042 108 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cdx2P43241 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Gm37723-201ENSMUST00000194480 565 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 Gm18001-201ENSMUST00000212023 688 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Cdx2P43241 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
Cdx2P43241 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.64□□□□□ -0.71
Cdx2P43241 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.64□□□□□ -0.71
Cdx2P43241 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cdx2P43241 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Cdx2P43241 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cdx2P43241 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Cdx2P43241 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.63□□□□□ -0.71
Cdx2P43241 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdx2P43241 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.63□□□□□ -0.71
Cdx2P43241 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC10.63□□□□□ -0.71
Cdx2P43241 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.63□□□□□ -0.71
Cdx2P43241 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cdx2P43241 Gm9166-201ENSMUST00000120293 561 ntBASIC10.63□□□□□ -0.71
Cdx2P43241 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Gm25872-201ENSMUST00000177784 100 ntBASIC10.63□□□□□ -0.71
Cdx2P43241 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdx2P43241 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.63□□□□□ -0.71
Cdx2P43241 Gm6331-201ENSMUST00000217890 450 ntBASIC10.63□□□□□ -0.71
Cdx2P43241 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms