Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm13171-201ENSMUST00000117233 391 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm13286-201ENSMUST00000117750 537 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm11952-201ENSMUST00000121172 821 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm24943-201ENSMUST00000158329 433 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm37207-201ENSMUST00000194284 296 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm18123-201ENSMUST00000210874 822 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm18001-201ENSMUST00000212023 688 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.35□□□□□ -0.75
Sftpa1P35242 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.35□□□□□ -0.75
Sftpa1P35242 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sftpa1P35242 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Sftpa1P35242 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sftpa1P35242 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm11380-201ENSMUST00000118067 560 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm19927-201ENSMUST00000185792 781 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm6644-201ENSMUST00000186507 951 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 AC134537.1-201ENSMUST00000219205 265 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm10020-201ENSMUST00000081993 612 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sftpa1P35242 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms