Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm13351-201ENSMUST00000118087 414 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm17192-201ENSMUST00000169031 511 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm19246-201ENSMUST00000173599 255 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nfkb1P25799 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.53□□□□□ -0.56
Nfkb1P25799 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.53□□□□□ -0.56
Nfkb1P25799 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nfkb1P25799 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.52□□□□□ -0.56
Nfkb1P25799 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.52□□□□□ -0.56
Nfkb1P25799 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.52□□□□□ -0.56
Nfkb1P25799 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Nfkb1P25799 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.52□□□□□ -0.56
Nfkb1P25799 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.52□□□□□ -0.56
Nfkb1P25799 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nfkb1P25799 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.52□□□□□ -0.57
Nfkb1P25799 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm25053-201ENSMUST00000103982 133 ntBASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm25922-201ENSMUST00000104281 130 ntBASIC11.52□□□□□ -0.57
Nfkb1P25799 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm24679-201ENSMUST00000158762 111 ntBASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm16030-201ENSMUST00000159098 603 ntBASIC11.52□□□□□ -0.57
Nfkb1P25799 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm25053-202ENSMUST00000199731 132 ntBASIC11.52□□□□□ -0.57
Nfkb1P25799 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.52□□□□□ -0.57
Nfkb1P25799 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nfkb1P25799 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nfkb1P25799 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nfkb1P25799 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nfkb1P25799 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms