Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm11956-201ENSMUST00000119525 512 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm11622-201ENSMUST00000120525 691 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm24241-201ENSMUST00000157787 145 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm3332-201ENSMUST00000189337 928 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm17889-201ENSMUST00000198410 598 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 AC153522.1-201ENSMUST00000220047 1090 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm26448-201ENSMUST00000082446 203 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm37145-201ENSMUST00000193540 2756 ntBASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf9P20334 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm8199-201ENSMUST00000121323 823 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm10012-202ENSMUST00000170379 372 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm27910-201ENSMUST00000185004 107 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm37678-201ENSMUST00000192908 1146 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.49□□□□□ -0.89
Tnfrsf9P20334 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms