Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm28324-201ENSMUST00000187913 264 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.41□□□□□ -0.9
Hoxa3P02831 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm23680-201ENSMUST00000083162 164 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm29410-201ENSMUST00000188383 694 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm5468-202ENSMUST00000227851 682 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm10263-201ENSMUST00000085163 300 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.4□□□□□ -0.9
Hoxa3P02831 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Hoxa3P02831 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxa3P02831 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.4□□□□□ -0.91
Hoxa3P02831 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Hoxa3P02831 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxa3P02831 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxa3P02831 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxa3P02831 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.39□□□□□ -0.91
Hoxa3P02831 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.39□□□□□ -0.91
Hoxa3P02831 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxa3P02831 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 186.5 ms