Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifnb1P01575 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ifnb1P01575 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifnb1P01575 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ifnb1P01575 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ifnb1P01575 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifnb1P01575 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifnb1P01575 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifnb1P01575 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ifnb1P01575 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Ifnb1P01575 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifnb1P01575 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Ifnb1P01575 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Ifnb1P01575 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ifnb1P01575 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm10051-201ENSMUST00000145209 414 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm24074-201ENSMUST00000158178 260 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ifnb1P01575 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ifnb1P01575 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm5468-202ENSMUST00000227851 682 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm5451-201ENSMUST00000080545 579 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ifnb1P01575 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.77□□□□□ -0.53
Ifnb1P01575 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifnb1P01575 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm23272-201ENSMUST00000104053 129 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm9062-201ENSMUST00000117712 727 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm8302-201ENSMUST00000119217 852 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm15573-201ENSMUST00000119487 540 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm4726-201ENSMUST00000135604 736 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm6019-201ENSMUST00000148369 736 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm23045-201ENSMUST00000175041 96 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.76□□□□□ -0.53
Ifnb1P01575 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifnb1P01575 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms