Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.69□□□□□ -0.06
U2af1Q9D883 Gm9673-201ENSMUST00000119287 781 ntBASIC14.69□□□□□ -0.06
U2af1Q9D883 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC14.69□□□□□ -0.06
U2af1Q9D883 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
U2af1Q9D883 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.69□□□□□ -0.06
U2af1Q9D883 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.69□□□□□ -0.06
U2af1Q9D883 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
U2af1Q9D883 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.69□□□□□ -0.06
U2af1Q9D883 Gm18968-201ENSMUST00000221319 862 ntBASIC14.69□□□□□ -0.06
U2af1Q9D883 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
U2af1Q9D883 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
U2af1Q9D883 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
U2af1Q9D883 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.68□□□□□ -0.06
U2af1Q9D883 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.68□□□□□ -0.06
U2af1Q9D883 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.68□□□□□ -0.06
U2af1Q9D883 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.68□□□□□ -0.06
U2af1Q9D883 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
U2af1Q9D883 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
U2af1Q9D883 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
U2af1Q9D883 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm19178-201ENSMUST00000217524 1819 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Mir453-201ENSMUST00000104732 82 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Snord23-201ENSMUST00000116828 109 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm16030-201ENSMUST00000159098 603 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm7082-201ENSMUST00000209880 969 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm9102-201ENSMUST00000219250 465 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.67□□□□□ -0.06
U2af1Q9D883 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
U2af1Q9D883 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
U2af1Q9D883 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
U2af1Q9D883 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
U2af1Q9D883 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
U2af1Q9D883 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
U2af1Q9D883 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
U2af1Q9D883 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.66□□□□□ -0.06
U2af1Q9D883 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
U2af1Q9D883 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
U2af1Q9D883 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
U2af1Q9D883 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
U2af1Q9D883 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms