Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm5370-201ENSMUST00000187187 574 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm5982-201ENSMUST00000196234 512 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm8956-201ENSMUST00000203939 825 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3a3Q9D554 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm12390-201ENSMUST00000117897 397 ntBASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm38158-201ENSMUST00000194617 339 ntBASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC11.22□□□□□ -0.61
Sf3a3Q9D554 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3a3Q9D554 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.21□□□□□ -0.61
Sf3a3Q9D554 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms