Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smc1aQ9CU62 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm12579-201ENSMUST00000118040 783 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm8731-201ENSMUST00000118088 412 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm11675-201ENSMUST00000121873 832 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Mir6998-201ENSMUST00000183343 64 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smc1aQ9CU62 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm16071-201ENSMUST00000119589 793 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm15610-201ENSMUST00000120584 195 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm4654-201ENSMUST00000183305 982 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Mir8115-201ENSMUST00000184992 119 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm17826-201ENSMUST00000189720 798 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smc1aQ9CU62 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms