Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm14270-201ENSMUST00000118388 846 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm15197-201ENSMUST00000120526 478 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm13445-201ENSMUST00000121664 307 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Capsl-202ENSMUST00000226688 739 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm5555-201ENSMUST00000120352 1111 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm38314-201ENSMUST00000195709 625 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm43163-201ENSMUST00000196571 442 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm7192-201ENSMUST00000210793 1137 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm15196-201ENSMUST00000121406 482 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC9.19□□□□□ -0.94
Prpf8Q99PV0 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.19□□□□□ -0.94
Prpf8Q99PV0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms