Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Usp11Q99K46 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.81□□□□□ -0.52
Usp11Q99K46 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp11Q99K46 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.81□□□□□ -0.52
Usp11Q99K46 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp11Q99K46 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Usp11Q99K46 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Usp11Q99K46 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.81□□□□□ -0.52
Usp11Q99K46 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.81□□□□□ -0.52
Usp11Q99K46 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.81□□□□□ -0.52
Usp11Q99K46 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.81□□□□□ -0.52
Usp11Q99K46 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.81□□□□□ -0.52
Usp11Q99K46 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Usp11Q99K46 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.81□□□□□ -0.52
Usp11Q99K46 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.81□□□□□ -0.52
Usp11Q99K46 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Usp11Q99K46 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Usp11Q99K46 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Gm14193-201ENSMUST00000105067 153 ntBASIC11.8□□□□□ -0.52
Usp11Q99K46 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.8□□□□□ -0.52
Usp11Q99K46 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.8□□□□□ -0.52
Usp11Q99K46 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Gm18065-201ENSMUST00000221395 526 ntBASIC11.8□□□□□ -0.52
Usp11Q99K46 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Usp11Q99K46 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Usp11Q99K46 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm15432-201ENSMUST00000121106 195 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm7666-201ENSMUST00000146631 819 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm8459-201ENSMUST00000162504 760 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm3150-201ENSMUST00000166418 204 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Mir7686-201ENSMUST00000200604 57 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm44100-201ENSMUST00000204329 436 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.79□□□□□ -0.52
Usp11Q99K46 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms