Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm22133-201ENSMUST00000102082 109 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm26286-201ENSMUST00000104166 134 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm12931-201ENSMUST00000117046 324 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm15610-201ENSMUST00000120584 195 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm28060-201ENSMUST00000191554 189 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm37438-201ENSMUST00000192813 393 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm18839-201ENSMUST00000204292 670 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm19039-201ENSMUST00000204363 575 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm18039-201ENSMUST00000217816 728 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb17Q91VD8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Map1b-203ENSMUST00000223725 2669 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 AC156025.2-201ENSMUST00000225907 1533 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm36990-201ENSMUST00000191961 1412 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm24749-201ENSMUST00000157838 343 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Zfp738-204ENSMUST00000175678 609 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm7003-201ENSMUST00000195089 312 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm43582-201ENSMUST00000196149 343 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC12.48□□□□□ -0.41
Pcdhb17Q91VD8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms