Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim29Q8R2Q0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Snord17-201ENSMUST00000104526 238 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Gm12176-201ENSMUST00000121420 875 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim29Q8R2Q0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.77□□□□□ -0.36
Trim29Q8R2Q0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Gm23272-201ENSMUST00000104053 129 ntBASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 Gm21778-201ENSMUST00000178779 471 ntBASIC12.77□□□□□ -0.37
Trim29Q8R2Q0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms