Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28aQ8CEI3 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc28aQ8CEI3 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28aQ8CEI3 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc28aQ8CEI3 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc28aQ8CEI3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.77□□□□□ -0.52
Ccdc28aQ8CEI3 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm13263-201ENSMUST00000121271 838 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm3961-201ENSMUST00000204425 994 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm44262-201ENSMUST00000204969 372 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm10288-201ENSMUST00000084614 537 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28aQ8CEI3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm25881-201ENSMUST00000157783 103 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm27530-201ENSMUST00000184096 98 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm27320-201ENSMUST00000184892 109 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28aQ8CEI3 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc28aQ8CEI3 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms