Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Gm4857-201ENSMUST00000192718 785 ntBASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.46□□□□□ -0.9
Nhlrc3Q8CCH2 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm15617-201ENSMUST00000118973 771 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm22846-201ENSMUST00000157706 270 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Olfml3-204ENSMUST00000169286 874 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm27320-201ENSMUST00000184892 109 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm7003-201ENSMUST00000195089 312 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm7783-201ENSMUST00000204795 781 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm6108-201ENSMUST00000208365 367 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm45856-201ENSMUST00000212752 416 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nhlrc3Q8CCH2 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms