Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm44100-201ENSMUST00000204329 436 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trub1Q8C0D0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.56
Trub1Q8C0D0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm30946-201ENSMUST00000198288 724 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm44323-201ENSMUST00000198689 129 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.52□□□□□ -0.57
Trub1Q8C0D0 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trub1Q8C0D0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Gm9132-201ENSMUST00000210182 832 ntBASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trub1Q8C0D0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trub1Q8C0D0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms