Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.36□□□□□ -0.59
Sh3rf2Q8BZT2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm14165-201ENSMUST00000121456 952 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm26989-201ENSMUST00000182608 749 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm44647-201ENSMUST00000207402 428 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh3rf2Q8BZT2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm6158-201ENSMUST00000109467 904 ntBASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm14213-201ENSMUST00000119778 768 ntBASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm16165-201ENSMUST00000160140 795 ntBASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Mir7035-201ENSMUST00000184713 82 ntBASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sh3rf2Q8BZT2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sh3rf2Q8BZT2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sh3rf2Q8BZT2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms