Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm11573-201ENSMUST00000119956 394 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm9550-201ENSMUST00000161130 862 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Platr10-202ENSMUST00000191479 818 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm37986-201ENSMUST00000193285 383 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm37301-201ENSMUST00000195412 568 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm18753-201ENSMUST00000201000 566 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm9463-201ENSMUST00000206707 601 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rpp38Q80UU2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm12986-201ENSMUST00000119037 967 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm25554-201ENSMUST00000158075 113 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rpp38Q80UU2 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rpp38Q80UU2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms