Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm8459-201ENSMUST00000162504 760 ntBASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Mir3102-201ENSMUST00000175555 104 ntBASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm27341-201ENSMUST00000183570 106 ntBASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gm18827-201ENSMUST00000188341 790 ntBASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trim43aQ3TL54 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm17040-202ENSMUST00000170597 889 ntBASIC11.86□□□□□ -0.51
Trim43aQ3TL54 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm18753-201ENSMUST00000201000 566 ntBASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm6867-201ENSMUST00000219165 425 ntBASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm270-201ENSMUST00000223010 976 ntBASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim43aQ3TL54 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms