Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm22146-201ENSMUST00000157397 288 ntBASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm4862-201ENSMUST00000170405 438 ntBASIC12.11□□□□□ -0.47
Col9a2Q07643 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.11□□□□□ -0.47
Col9a2Q07643 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.11□□□□□ -0.47
Col9a2Q07643 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm45527-201ENSMUST00000211052 774 ntBASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.11□□□□□ -0.47
Col9a2Q07643 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.11□□□□□ -0.47
Col9a2Q07643 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm10020-201ENSMUST00000081993 612 ntBASIC12.11□□□□□ -0.47
Col9a2Q07643 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col9a2Q07643 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Col9a2Q07643 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Col9a2Q07643 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col9a2Q07643 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col9a2Q07643 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col9a2Q07643 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.11□□□□□ -0.47
Col9a2Q07643 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm14034-201ENSMUST00000120147 551 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm23647-201ENSMUST00000175042 109 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Rn5s-201ENSMUST00000177555 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm22109-201ENSMUST00000177995 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm22291-201ENSMUST00000178027 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm23284-201ENSMUST00000178069 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm25018-201ENSMUST00000179081 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm25212-201ENSMUST00000179432 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm26391-201ENSMUST00000179843 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm24089-201ENSMUST00000093696 109 ntBASIC12.1□□□□□ -0.47
Col9a2Q07643 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms