Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Npas1P97459 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.38□□□□□ -0.91
Npas1P97459 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Npas1P97459 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 AC165080.1-201ENSMUST00000215257 3123 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Npas1P97459 Gm11425-201ENSMUST00000119608 498 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Gm19287-201ENSMUST00000203190 358 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.37□□□□□ -0.91
Npas1P97459 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Gm9823-201ENSMUST00000051212 327 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Gm9396-201ENSMUST00000076703 567 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Npas1P97459 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.37□□□□□ -0.91
Npas1P97459 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.37□□□□□ -0.91
Npas1P97459 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.37□□□□□ -0.91
Npas1P97459 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.37□□□□□ -0.91
Npas1P97459 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Npas1P97459 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Npas1P97459 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Npas1P97459 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Npas1P97459 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.36□□□□□ -0.91
Npas1P97459 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Npas1P97459 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Npas1P97459 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC9.36□□□□□ -0.91
Npas1P97459 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Npas1P97459 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Gm5187-201ENSMUST00000117317 991 ntBASIC9.36□□□□□ -0.91
Npas1P97459 Gm15004-201ENSMUST00000119192 630 ntBASIC9.36□□□□□ -0.91
Npas1P97459 Gm13297-201ENSMUST00000120205 934 ntBASIC9.36□□□□□ -0.91
Npas1P97459 Gm11793-201ENSMUST00000120433 981 ntBASIC9.36□□□□□ -0.91
Npas1P97459 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Npas1P97459 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms