Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.38□□□□□ -0.91
SgcaP82350 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
SgcaP82350 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.38□□□□□ -0.91
SgcaP82350 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.38□□□□□ -0.91
SgcaP82350 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.38□□□□□ -0.91
SgcaP82350 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.38□□□□□ -0.91
SgcaP82350 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.38□□□□□ -0.91
SgcaP82350 Gm5950-201ENSMUST00000213337 772 ntBASIC9.38□□□□□ -0.91
SgcaP82350 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.38□□□□□ -0.91
SgcaP82350 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.38□□□□□ -0.91
SgcaP82350 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
SgcaP82350 Gm10312-201ENSMUST00000078515 489 ntBASIC9.38□□□□□ -0.91
SgcaP82350 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.38□□□□□ -0.91
SgcaP82350 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.38□□□□□ -0.91
SgcaP82350 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.38□□□□□ -0.91
SgcaP82350 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SgcaP82350 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SgcaP82350 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.37□□□□□ -0.91
SgcaP82350 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SgcaP82350 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.37□□□□□ -0.91
SgcaP82350 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.37□□□□□ -0.91
SgcaP82350 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.37□□□□□ -0.91
SgcaP82350 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.37□□□□□ -0.91
SgcaP82350 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SgcaP82350 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SgcaP82350 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
SgcaP82350 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.37□□□□□ -0.91
SgcaP82350 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SgcaP82350 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.37□□□□□ -0.91
SgcaP82350 Gm11511-201ENSMUST00000118146 540 ntBASIC9.37□□□□□ -0.91
SgcaP82350 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.37□□□□□ -0.91
SgcaP82350 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SgcaP82350 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.37□□□□□ -0.91
SgcaP82350 Gm5745-201ENSMUST00000183748 313 ntBASIC9.37□□□□□ -0.91
SgcaP82350 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.37□□□□□ -0.91
SgcaP82350 Gm2553-201ENSMUST00000215986 605 ntBASIC9.37□□□□□ -0.91
SgcaP82350 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.37□□□□□ -0.91
SgcaP82350 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.37□□□□□ -0.91
SgcaP82350 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.37□□□□□ -0.91
SgcaP82350 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SgcaP82350 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SgcaP82350 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms