Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgb1P63158 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hmgb1P63158 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm14193-201ENSMUST00000105067 153 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm4294-201ENSMUST00000105169 614 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm11941-201ENSMUST00000119904 610 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm11450-201ENSMUST00000121144 333 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm15549-201ENSMUST00000121595 622 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm27552-201ENSMUST00000183351 62 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm27844-201ENSMUST00000183613 62 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.37□□□□□ -0.43
Hmgb1P63158 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Kng2-201ENSMUST00000039338 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm37608-201ENSMUST00000195696 1880 ntBASIC12.37□□□□□ -0.43
Hmgb1P63158 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmgb1P63158 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmgb1P63158 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgb1P63158 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm14058-201ENSMUST00000116082 735 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm11573-201ENSMUST00000119956 394 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm14277-201ENSMUST00000121195 360 ntBASIC12.36□□□□□ -0.43
Hmgb1P63158 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.36□□□□□ -0.43
Hmgb1P63158 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgb1P63158 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms