Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC16.96■□□□□ 0.31
Cux1P53564 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Gm29245-201ENSMUST00000187332 1416 ntBASIC16.96■□□□□ 0.31
Cux1P53564 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Gm45776-201ENSMUST00000212366 1522 ntBASIC16.96■□□□□ 0.31
Cux1P53564 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cux1P53564 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Cux1P53564 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cux1P53564 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Cux1P53564 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cux1P53564 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cux1P53564 Gm12397-201ENSMUST00000117674 615 ntBASIC16.96■□□□□ 0.3
Cux1P53564 Gm16518-201ENSMUST00000117960 508 ntBASIC16.96■□□□□ 0.3
Cux1P53564 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC16.96■□□□□ 0.3
Cux1P53564 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cux1P53564 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cux1P53564 Gm5274-201ENSMUST00000182641 1003 ntBASIC16.96■□□□□ 0.3
Cux1P53564 Gm8226-201ENSMUST00000190511 798 ntBASIC16.96■□□□□ 0.3
Cux1P53564 Gm38233-201ENSMUST00000194259 807 ntBASIC16.96■□□□□ 0.3
Cux1P53564 AC124613.1-201ENSMUST00000198711 88 ntBASIC16.96■□□□□ 0.3
Cux1P53564 Gm43726-201ENSMUST00000199110 775 ntBASIC16.96■□□□□ 0.3
Cux1P53564 AC164087.2-201ENSMUST00000216206 1072 ntBASIC16.96■□□□□ 0.3
Cux1P53564 Gm8796-201ENSMUST00000219122 936 ntBASIC16.96■□□□□ 0.3
Cux1P53564 AC154477.1-201ENSMUST00000226515 773 ntBASIC16.96■□□□□ 0.3
Cux1P53564 AC137842.2-201ENSMUST00000227734 797 ntBASIC16.96■□□□□ 0.3
Cux1P53564 Klf10-203ENSMUST00000227920 2144 ntBASIC16.96■□□□□ 0.3
Cux1P53564 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cux1P53564 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cux1P53564 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC16.96■□□□□ 0.3
Cux1P53564 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cux1P53564 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cux1P53564 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cux1P53564 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC16.95■□□□□ 0.3
Cux1P53564 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC16.95■□□□□ 0.3
Cux1P53564 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC16.95■□□□□ 0.3
Cux1P53564 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC16.95■□□□□ 0.3
Cux1P53564 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cux1P53564 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC16.95■□□□□ 0.3
Cux1P53564 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Cux1P53564 AC154436.1-201ENSMUST00000227272 782 ntBASIC16.95■□□□□ 0.3
Cux1P53564 AC161172.1-201ENSMUST00000227801 486 ntBASIC16.95■□□□□ 0.3
Cux1P53564 AC164883.7-201ENSMUST00000228534 851 ntBASIC16.95■□□□□ 0.3
Cux1P53564 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Cux1P53564 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cux1P53564 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.94■□□□□ 0.3
Cux1P53564 AC137950.2-202ENSMUST00000227150 1635 ntBASIC16.94■□□□□ 0.3
Cux1P53564 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Cux1P53564 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC16.94■□□□□ 0.3
Cux1P53564 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC16.94■□□□□ 0.3
Cux1P53564 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC16.94■□□□□ 0.3
Cux1P53564 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Gm29304-201ENSMUST00000186555 695 ntBASIC16.94■□□□□ 0.3
Cux1P53564 Gm29223-201ENSMUST00000188867 695 ntBASIC16.94■□□□□ 0.3
Cux1P53564 Gm37921-201ENSMUST00000194333 695 ntBASIC16.94■□□□□ 0.3
Cux1P53564 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Gm18862-201ENSMUST00000204643 933 ntBASIC16.94■□□□□ 0.3
Cux1P53564 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC16.94■□□□□ 0.3
Cux1P53564 AC134913.2-201ENSMUST00000225017 771 ntBASIC16.94■□□□□ 0.3
Cux1P53564 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cux1P53564 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cux1P53564 Gm44241-201ENSMUST00000203230 1662 ntBASIC16.93■□□□□ 0.3
Cux1P53564 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cux1P53564 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cux1P53564 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms