Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Gm25562-201ENSMUST00000104608 133 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LtbrP50284 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Gm14497-201ENSMUST00000119537 580 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Gm12461-201ENSMUST00000120231 1239 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Gm4868-201ENSMUST00000164138 789 ntBASIC13.39□□□□□ -0.27
LtbrP50284 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Gm43952-201ENSMUST00000203765 751 ntBASIC13.39□□□□□ -0.27
LtbrP50284 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.39□□□□□ -0.27
LtbrP50284 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC13.39□□□□□ -0.27
LtbrP50284 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LtbrP50284 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LtbrP50284 AC154806.5-202ENSMUST00000227217 1443 ntBASIC13.39□□□□□ -0.27
LtbrP50284 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.38□□□□□ -0.27
LtbrP50284 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LtbrP50284 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.38□□□□□ -0.27
LtbrP50284 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Rubie-203ENSMUST00000227803 2430 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LtbrP50284 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm6461-201ENSMUST00000120015 633 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm16305-201ENSMUST00000140747 556 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm27956-201ENSMUST00000175604 260 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm3650-201ENSMUST00000180600 747 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm5335-201ENSMUST00000182995 1000 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm28937-201ENSMUST00000185413 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm29400-201ENSMUST00000187208 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm28662-201ENSMUST00000188446 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm28251-201ENSMUST00000188835 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC13.38□□□□□ -0.27
LtbrP50284 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm6606-201ENSMUST00000193613 947 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm37318-201ENSMUST00000194325 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm38017-201ENSMUST00000194768 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm37287-201ENSMUST00000195449 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm37793-201ENSMUST00000195548 695 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.38□□□□□ -0.27
LtbrP50284 BC080696-201ENSMUST00000202858 1218 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.38□□□□□ -0.27
LtbrP50284 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC13.38□□□□□ -0.27
LtbrP50284 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC13.38□□□□□ -0.27
LtbrP50284 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.38□□□□□ -0.27
LtbrP50284 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LtbrP50284 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LtbrP50284 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LtbrP50284 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.38□□□□□ -0.27
LtbrP50284 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.38□□□□□ -0.27
LtbrP50284 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LtbrP50284 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms