Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Sox6P40645 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Sox6P40645 Gm4909-201ENSMUST00000118749 794 ntBASIC10.53□□□□□ -0.72
Sox6P40645 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Sox6P40645 Gm8815-201ENSMUST00000173809 620 ntBASIC10.53□□□□□ -0.72
Sox6P40645 Gm4310-201ENSMUST00000177847 889 ntBASIC10.53□□□□□ -0.72
Sox6P40645 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.53□□□□□ -0.72
Sox6P40645 AU022133-201ENSMUST00000200601 873 ntBASIC10.53□□□□□ -0.72
Sox6P40645 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Sox6P40645 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.53□□□□□ -0.72
Sox6P40645 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox6P40645 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.53□□□□□ -0.72
Sox6P40645 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
Sox6P40645 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sox6P40645 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox6P40645 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox6P40645 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Sox6P40645 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.52□□□□□ -0.72
Sox6P40645 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Gm23200-201ENSMUST00000104379 132 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox6P40645 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Sox6P40645 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Sox6P40645 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.52□□□□□ -0.73
Sox6P40645 Gm18734-201ENSMUST00000172937 808 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox6P40645 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm28937-201ENSMUST00000185413 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm29400-201ENSMUST00000187208 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Gm28662-201ENSMUST00000188446 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm28251-201ENSMUST00000188835 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Sox6P40645 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.52□□□□□ -0.73
Sox6P40645 Gm37318-201ENSMUST00000194325 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm38017-201ENSMUST00000194768 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm37287-201ENSMUST00000195449 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm37793-201ENSMUST00000195548 695 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.52□□□□□ -0.73
Sox6P40645 Gm6439-201ENSMUST00000199849 862 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm4482-201ENSMUST00000200876 742 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.52□□□□□ -0.73
Sox6P40645 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox6P40645 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sox6P40645 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Sox6P40645 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox6P40645 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.52□□□□□ -0.73
Sox6P40645 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sox6P40645 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox6P40645 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox6P40645 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox6P40645 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox6P40645 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox6P40645 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox6P40645 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox6P40645 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms