Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm25580-201ENSMUST00000083409 327 ntBASIC16.63■□□□□ 0.25
NclP09405 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NclP09405 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NclP09405 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Gm44106-201ENSMUST00000203153 1599 ntBASIC16.63■□□□□ 0.25
NclP09405 Gm43102-201ENSMUST00000201004 2324 ntBASIC16.63■□□□□ 0.25
NclP09405 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC16.63■□□□□ 0.25
NclP09405 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC16.62■□□□□ 0.25
NclP09405 Gm44056-201ENSMUST00000204623 1427 ntBASIC16.62■□□□□ 0.25
NclP09405 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NclP09405 Gm37651-201ENSMUST00000194679 1494 ntBASIC16.62■□□□□ 0.25
NclP09405 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
NclP09405 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Gm22146-201ENSMUST00000157397 288 ntBASIC16.62■□□□□ 0.25
NclP09405 Gm25830-201ENSMUST00000158923 132 ntBASIC16.62■□□□□ 0.25
NclP09405 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC16.62■□□□□ 0.25
NclP09405 Gm43692-201ENSMUST00000198236 1062 ntBASIC16.62■□□□□ 0.25
NclP09405 Gm8255-201ENSMUST00000218693 305 ntBASIC16.62■□□□□ 0.25
NclP09405 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC16.62■□□□□ 0.25
NclP09405 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NclP09405 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Gm44153-201ENSMUST00000204162 1580 ntBASIC16.62■□□□□ 0.25
NclP09405 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC16.62■□□□□ 0.25
NclP09405 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Gm43152-201ENSMUST00000202495 1638 ntBASIC16.62■□□□□ 0.25
NclP09405 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NclP09405 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NclP09405 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Gm45776-201ENSMUST00000212366 1522 ntBASIC16.61■□□□□ 0.25
NclP09405 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Gm11801-201ENSMUST00000117807 746 ntBASIC16.61■□□□□ 0.25
NclP09405 Gm14497-201ENSMUST00000119537 580 ntBASIC16.61■□□□□ 0.25
NclP09405 Ighv2-1-201ENSMUST00000170946 353 ntBASIC16.61■□□□□ 0.25
NclP09405 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NclP09405 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NclP09405 AC129975.1-201ENSMUST00000224816 592 ntBASIC16.61■□□□□ 0.25
NclP09405 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NclP09405 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC16.61■□□□□ 0.25
NclP09405 Mir483-201ENSMUST00000093631 73 ntBASIC16.61■□□□□ 0.25
NclP09405 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NclP09405 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NclP09405 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.6■□□□□ 0.25
NclP09405 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC16.6■□□□□ 0.25
NclP09405 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NclP09405 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Snord17-201ENSMUST00000104526 238 ntBASIC16.6■□□□□ 0.25
NclP09405 Gm12389-201ENSMUST00000117696 418 ntBASIC16.6■□□□□ 0.25
NclP09405 Gm11980-201ENSMUST00000121445 986 ntBASIC16.6■□□□□ 0.25
NclP09405 Gm36991-201ENSMUST00000191800 648 ntBASIC16.6■□□□□ 0.25
NclP09405 Gm44814-201ENSMUST00000207018 434 ntBASIC16.6■□□□□ 0.25
NclP09405 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NclP09405 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NclP09405 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NclP09405 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NclP09405 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NclP09405 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NclP09405 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms