Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.43□□□□□ -0.9
Hoxa3P02831 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Hoxa3P02831 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm4294-201ENSMUST00000105169 614 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm11500-201ENSMUST00000118237 601 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm20614-201ENSMUST00000177106 632 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Mir6958-201ENSMUST00000184207 73 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm5100-201ENSMUST00000195631 589 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm42518-201ENSMUST00000196277 938 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.42□□□□□ -0.9
Hoxa3P02831 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Hoxa3P02831 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Hoxa3P02831 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.42□□□□□ -0.9
Hoxa3P02831 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxa3P02831 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxa3P02831 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxa3P02831 Mir6407-201ENSMUST00000184510 101 ntBASIC9.41□□□□□ -0.9
Hoxa3P02831 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxa3P02831 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms