Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm8482-201ENSMUST00000117972 471 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm13777-201ENSMUST00000118208 345 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm13841-201ENSMUST00000118829 483 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm11449-201ENSMUST00000119175 476 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm8210-201ENSMUST00000178557 483 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm15454-201ENSMUST00000179718 483 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm45893-201ENSMUST00000211899 247 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Gm6344-201ENSMUST00000075962 483 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Snora68-201ENSMUST00000104375 131 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm13505-201ENSMUST00000121666 817 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm37944-201ENSMUST00000194233 414 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm21631-201ENSMUST00000195041 754 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm12377-201ENSMUST00000118656 252 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col4a6B1AVK5 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.3□□□□□ -0.6
Col4a6B1AVK5 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms