Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SrfQ9JM73 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SrfQ9JM73 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SrfQ9JM73 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.86□□□□□ -0.67
SrfQ9JM73 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SrfQ9JM73 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SrfQ9JM73 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SrfQ9JM73 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SrfQ9JM73 Gm38368-201ENSMUST00000193181 1335 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
SrfQ9JM73 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Mir671-201ENSMUST00000102432 98 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm17221-201ENSMUST00000163909 481 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm5529-201ENSMUST00000165691 891 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm17073-201ENSMUST00000168069 556 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm4540-201ENSMUST00000170669 429 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SrfQ9JM73 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm5700-201ENSMUST00000191483 989 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm19214-201ENSMUST00000191956 1083 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm45258-201ENSMUST00000210042 853 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm45733-201ENSMUST00000212988 437 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.85□□□□□ -0.67
SrfQ9JM73 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm10020-201ENSMUST00000081993 612 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.85□□□□□ -0.67
SrfQ9JM73 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.85□□□□□ -0.67
SrfQ9JM73 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SrfQ9JM73 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.84□□□□□ -0.67
SrfQ9JM73 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 CT030185.2-201ENSMUST00000222614 1310 ntBASIC10.84□□□□□ -0.67
SrfQ9JM73 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.84□□□□□ -0.67
SrfQ9JM73 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SrfQ9JM73 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.84□□□□□ -0.67
SrfQ9JM73 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SrfQ9JM73 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.84□□□□□ -0.67
SrfQ9JM73 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SrfQ9JM73 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms