Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Sec61a2Q9JLR1 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gm15432-201ENSMUST00000121106 195 ntBASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gm20495-201ENSMUST00000173902 235 ntBASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a2Q9JLR1 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms