Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Gm9102-201ENSMUST00000219250 465 ntBASIC9.22□□□□□ -0.93
Prpf8Q99PV0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC9.22□□□□□ -0.93
Prpf8Q99PV0 AC142266.1-201ENSMUST00000228107 415 ntBASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Prpf8Q99PV0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm23612-201ENSMUST00000103823 110 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Mir453-201ENSMUST00000104732 82 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm11560-201ENSMUST00000117567 948 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm12337-201ENSMUST00000119634 400 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Olfml3-204ENSMUST00000169286 874 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm23576-201ENSMUST00000179918 110 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm6423-201ENSMUST00000204315 934 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm2594-201ENSMUST00000214774 742 ntBASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Prpf8Q99PV0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Gm13422-201ENSMUST00000118834 504 ntBASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Gm14234-201ENSMUST00000119539 845 ntBASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Gm6644-201ENSMUST00000186507 951 ntBASIC9.21□□□□□ -0.94
Prpf8Q99PV0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Prpf8Q99PV0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Prpf8Q99PV0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms