Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm29487-201ENSMUST00000190146 256 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm43833-201ENSMUST00000198828 293 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm42867-201ENSMUST00000202995 469 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm6721-201ENSMUST00000218353 1445 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm9864-201ENSMUST00000090043 1656 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Snora68-201ENSMUST00000104375 131 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm13543-201ENSMUST00000121230 796 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Pea15b-202ENSMUST00000183185 555 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm17764-201ENSMUST00000185925 391 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm44159-201ENSMUST00000204065 442 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm6008-201ENSMUST00000206542 874 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 AC161172.1-201ENSMUST00000227801 486 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm8809-201ENSMUST00000119367 743 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm8796-201ENSMUST00000219122 936 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 AC153566.1-201ENSMUST00000216441 2057 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm11231-201ENSMUST00000117895 1706 ntBASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh23Q99PF4 Gm12397-201ENSMUST00000117674 615 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm11235-201ENSMUST00000117763 333 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Mir675-201ENSMUST00000102320 84 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm5400-201ENSMUST00000118494 943 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm14108-201ENSMUST00000122234 494 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm3355-201ENSMUST00000160079 487 ntBASIC11.03□□□□□ -0.64
Cdh23Q99PF4 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms