Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm14274-201ENSMUST00000117182 615 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm25604-201ENSMUST00000158359 133 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm17192-201ENSMUST00000169031 511 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm43610-201ENSMUST00000199117 365 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm43912-201ENSMUST00000204352 538 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm45856-201ENSMUST00000212752 416 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc17Q8CE13 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm12218-201ENSMUST00000117666 399 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm13019-201ENSMUST00000120000 276 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm12453-201ENSMUST00000121981 331 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm25830-201ENSMUST00000158923 132 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Gm18165-201ENSMUST00000217426 928 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc17Q8CE13 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms